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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015856192.1_cds_XP_016513066.1_25645
CDS Infomation

[gene=LOC107830097] [db_xref=GeneID:107830097] [protein=abscisic acid 8'-hydroxylase 1-like] [protein_id=XP_016513066.1] [location=join(52716..52915,53018..53336,53480..53866,53978..54152,54279..54385,54488..54606,54732..54834)] [gbkey=CDS]
Sequence

ATGGAGTTTGTTTCTATGTTCTGCTTATTTGCTATTGTTTCTTTCTCTCTTCTTCTTATC
CATTCAATCTTCAAGTTCTTGGCTTTTGCTGCCAAGAAATTGCCTCTTCCTCCTGGCACT
TTGGGTTGGCCTTATATTGGAGAAACTTTCCAACTTTACTCTCAAAATCCCAATGTTTTC
TTTGCCTCCAAAGTCAAAAAGTATGGTTCAATATTCAAGACTCACATATTGGGTTGTAAA
TGTGTGATGATATCAAGTCCTGAAGCAGCTAAACAAGTTTTAGTCACAAGAGCTAACTTA
TTTAAGCCTACATTTCCAGCTAGTAAAGAGAGAATGTTGGGAAAACAAGCAATTTTCTTT
CATCAAGGTGATTACCATGCTAAGTTGAGGAAATTAGTACTTCGTGCTTTCATGCCTGAA
TCGATCAGAAACATCGTCCCAGATATCGAACCCATCGCCAAAACTACGCTCGAATCATTC
GAAGGAAGATTAATCAACACTTATCAAGAAATGAAGACATATACATTCAACGTTGCATTG
ATTTCAATATTTGGAAAAGATGAAATCCTGTACAGAGAAGATCTAAAGAGGTGTTATTAC
ATTCTTGAAAAAGGGTACAATTCAATGCCAATTAATCTTCCTGGTACACTATTCAACAAA
GCAATGAAAGCAAGGAAGGAATTAGCAAAAATTGTTGCCAAAATCATCTCAACTAGAAGG
GAAATGAAGATAAATCATACCGATTTGCTCGGTTCTTTTATGGGAGATAAAGAAGGACTC
ACTGACGAACAAATTGCAGATAATATCATTGGTGTGATTTTTGCAGCTAGAGACACTACT
GCTAGTGTTCTTACATGGATCCTTAAATTTCTCGGAGAAAATCCTAGTGTCCTACATGCT
GTCACAGAAGAACAAGAGGCTATAATGAGAAATAAAGAGGAGAATGGTGAAAAAAAAATT
CTAAATTGGGCAGATACTAAAAAGATGCCTTTGACTACAAGAGTGATTCAAGAAACACTC
AGAGTTGCTTCTATCTTATCTTTTACTTTCAGAGAAGCTGTTGAAGATGTTGAATTTGAA
GGATATTTAATACCTAAAGGATGGAAAGTACTACCACTCTTTAGAAACATTCACCACAGC
CCAGACAATTTTCCTGAGCCAGAGAAATTTGATCCTTCAAGATTTGAGGTGTCACCAAAG
CCCAATACTTTCATGCCATTTGGCAATGGGGTCCACTCATGTCCAGGGAATGAATTAGCC
AAGCTGGAGATTTTGGTTCTTGTACATCATTTGACCACAAAGTACAGGTGGTCTATGATG
GGCCCACAAAATGGAATTCAGTATGGGCCATTTGCTCTTCCCCAAAATGGTTTGCCCATT
AAGCTATATCCCAAGAATTCATCACTATAA

Peptide Sequence

PEP ID

XP_016513066.1
PEP Infomation

PREDICTED: abscisic acid 8'-hydroxylase 1-like [Nicotiana tabacum]
Sequence

MEFVSMFCLFAIVSFSLLLIHSIFKFLAFAAKKLPLPPGTLGWPYIGETFQLYSQNPNVF
FASKVKKYGSIFKTHILGCKCVMISSPEAAKQVLVTRANLFKPTFPASKERMLGKQAIFF
HQGDYHAKLRKLVLRAFMPESIRNIVPDIEPIAKTTLESFEGRLINTYQEMKTYTFNVAL
ISIFGKDEILYREDLKRCYYILEKGYNSMPINLPGTLFNKAMKARKELAKIVAKIISTRR
EMKINHTDLLGSFMGDKEGLTDEQIADNIIGVIFAARDTTASVLTWILKFLGENPSVLHA
VTEEQEAIMRNKEENGEKKILNWADTKKMPLTTRVIQETLRVASILSFTFREAVEDVEFE
GYLIPKGWKVLPLFRNIHHSPDNFPEPEKFDPSRFEVSPKPNTFMPFGNGVHSCPGNELA
KLEILVLVHHLTTKYRWSMMGPQNGIQYGPFALPQNGLPIKLYPKNSSL

Transcript Sequence

Gene sequence data has not been registered.